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Centre for Bioinformatics

 

The Center of Bioinformatics (Sub DIC) set up with support from DBT in 1998 has created a major impact and popularized Bioinformatics especially among women. The centre continues to excel in its academic pursuits in both training and research and it caters to nearly all areas in bioinformatics with a multifaceted and interdisciplinary approach in teaching, research and learning.

 

The core objectives of the Bioinformatics Centre at Banasthali Vidyapith are as follows:

i.      Information Dissemination in Biotechnology

ii.     Bioinformatics Research and Development & Human Resource Development.

 

The Bioinformatics Centre at Banasthali envisions itself as ‘National Centre for Bioinformatics' nurturing women to become world class teachers, researchers and scientists with a long term goal to:

 

  •   train and create dedicated manpower in emerging areas of bioinformatics.

  •
  •   provide state of the art Bioinformatics Research and Development facilities to the students, faculty members and collaborators.

  •
  •   provide cost effective solutions to the existing societal issues in the areas of education and healthcare through bioinformatics tools and techniques.

  •
  •   enable and facilitate academia-academia and also industry-academia partnership in research through collaborative and sponsored projects.

  •
  •   emerge as a leading hub of activities in Bioinformatics sphere.

 

The Centre is providing computational services to the UG, PG students in Biotechnology, Bioscience and Bioinformatics, Ph.D. scholars and the teaching faculty as follows:

  • Literature and databases search
  • Computational analysis
  • Application of available software in the centre
  • regular short/ long term training programmes

 

Infrastructure:

The Bioinformatics Centre is housed in the Department of Bioscience and Biotechnology, Banasthali Vidyapith and has developed good computational infrastructure including three computer labs, two with a capacity of 50 computers each and one with a capacity of 80 computers, a server room and has round the clock Internet connectivity. There is addition dedicated sitting arrangement for Centre staff. All the laboratories and server room are fully furnished, air conditioned with adequate backup power supply.

The Centre has acquired many databases and software's The Centre has sufficient number of desktop computers, workstations, laptop, projection facility, and several software and databases.

Manpower:

S. No.

Position

Highest relevant Educational qualification/Specialization

Job Profile

1.               

Prof.  Dipjyoti Chakraborty

Ph. D./ Plant Stress Biology, Medicinal plant Biotechnology Proteomics

Centre Coordinator

Centre Staff

2.               

Dr. S.R.Choudhary

PhD (Computer Science),  M. Sc. Bioinformatics, MCA

Computer Operator

3.               

Mr. Deepak Sharma

M. Sc. Information Technology

Computer Operator

4.               

Mr. Amit Goyal

M. Sc. Computer Science, MCSE, CCNA, PGDCA, O Level

Data Entry Operator

5.               

Ms. Anukriti Saran

M. Sc. Bioinformatics

Information Officer

6.               

Mrs. Kiran Shanti

M. Sc. Botany, PG Diploma in PPIM

Technical Assistant

 

Collaborating Departments at Banasthali Vidyapith:

  •   Automation

  •   Bioscience and Biotechnology

  •   Computer Science

  •   Mathematics and Statistics

  •
  •   Pharmacy

  •
  •   Atal Incubation Centre

 

Workshops/Trainings:

Since its inception, several workshops and training programs have been organized by the Centre and over 900 participants from various institutions all over the country have been trained including faculty members, research scholars and PG students. In addition to general bioinformatics and introduction to information technology in biology, in recent years, the training programmes are more specific to the core areas of bioinformatics such as sequence and genome analyses, protein modeling and dynamics and computational drug design and discovery.

The titles of representative workshops highlighting the diverse topics covered at the Centre are as follows:

Date (from-to)

Title

24-26 march 2001

Application of Internet in Advanced Teaching and Research in Biological Sciences

16-17 Feb 2002

Application of Information Technology in Biotechnology based research

16-17 Jan 2004

Trends in Bioinformatics

19-20 Feb 2005

Bioinformatics Basics- Application in Biological Sciences

22-24 Dec 2007

Biological Databases and Data  Mining

18-20 Dec 2010

Biological Databases and Data Mining Approaches

17-19 Feb 2012

Applications of Bioinformatics with special focus on Genomics

8-10 March 2014

In silico genome and proteome analysis

2-4 March 2017

Protein Structure Prediction and Function Analysis

11-13 March 2019

Biomolecular Recognition and  Dynamics

 

Certificate/ Diploma courses:

  • Computer Aided Drug Design and Molecular Modeling
  • Computational Biology

 

Major Research Activities in Bioinformatics [Last 5 Years (2015-19)]

 

The centre has trained 18 masters' level students in terms of studentship/traineeship some of whom have gone ahead to do further research and some have joined the academia and Industry.

A total of 98 masters and 9 Ph.D. degrees have been awarded in bioinformatics, with 83 research papers in core areas of bioinformatics utilizing the Center resources.

The research is primarily focused in the following areas:

  • Structural Bioinformatics:
  •   To study the active pockets of binding of protein and behavior of binding to their partners

  •
  •   String search for literature based protein - protein interaction networking (PPIN) and docking study.

  •
  •   Thermo-stability and protein mutagenesis hot-spot prediction.

 

  • Biodiversity Informatics:
  •   Database of the digitalized collection of resources for plant species identification

  •
  •   Database of Invasive alien species of Indian Desert

  •
  •   Database of plant species with known evidence of habitat fragmentation

  •
  •   Database of endangered plant and species of India desert over period of last 20 years.

  •
  •   Database of new plants species being discovered over the period of last 20 years from Rajasthan.

 

  • Metagenomics/High Throughput Genomics
  •   Elucidation of the functional role of genetic variants in bacteria causing drug resistance

  •
  •   Identification of the presence of novel drug targets or any adapted pathways in drug resistance mechanisms

  •
  •   Exploration of sequence-structure-function relationships of drug resistance associated genes

  •
  •   Development of altered antibiotic treatment methods that can overcome the existing resistance mechanism

 

To cater to the regional and national needs, the Centre has developed the following databases:

  • Biotechnical Industries of Rajasthan
  • SSR Database of Citrus sinensis
  • Database of Diterpene Synthase Gene
  • SSR Database of Takifugu rubripes
  • Database of Flora of Indian Desert
  • Database of Plant - Pathogen Interaction
  • MitoSatPlant: http://compubio.in/mitosatplant/
  • ChloroSSRdb: http://compubio.in/chlorossrdb/
  • CyanoSat: http://compubio.in/cyanosat/Home.aspx

 

 Biotechnical Industries of Rajasthan  SSR Database of Citrus sinensis

 Biotechnical Industries of Rajasthan

 SSR Database of Citrus sinensis
   
 SSR Database of Takifugu rubripes  Database of Flora of Indian Desert

 SSR Database of Takifugu rubripes

 Database of Flora of Indian Desert
 
 Banasthali Vidyapith Bioinformatics

 

List of Publications:       

Bioinformatics research papers published in peer reviewed journal by our centre:

S. No.

Authors

Title

Journal

Volume

Pages

2019

1.      

Singh, V., Katara, P. and Sharma, V.

Bioinformatics Resources and Approaches for The Interaction of Oryza sativa and Magnaporthe oryzae Pathosystem.

International Journal of Bioinformatics Research and Applications

15(2)

 

 

91-107

2.      

Ahmed, S.A., Joshi, N., Mathur, I. and Katyan, P.

Impact of Related Languages as Pivot Language on Machine Translation

International Journal of Recent Technology and Engineering

7

1539-1546

3.      

Singh, A. and Joshi, N.

Part of Speech Tagging of Hindi using Markov Model

International Journal of Innovative Technology and Exploring Engineering

8(6)

1723-1726

4.      

Seal, S. and Joshi, N.

Design of an Inflectional Rule-Based Assamese Stemmer

International Journal of Innovative Technology and Exploring Engineering (IJITEE)

8(6)

1651-1655

5.      

Katyayan, P. and Joshi, N.

Sarcasm Detection Approaches for English Language

Studies in Fuzziness and Soft Computing

374

167-183

6.      

Sharma, P. and Joshi, N.

Design and Development of a Knowledge-Based Approach for Word Sense Disambiguation by using WordNet for Hindi

International Journal of Innovative Technology and Exploring Engineering

8(3)

73-78

7.      

Gupta, C., Jain, A. and Joshi, N.

DE-ForABSA: A Novel Approach to Forecast Automobiles  Sales Using Aspect Based Sentiment Analysis and Differential Evolution

International Journal of Information Retrieval Research

9(1)

33-49

8.      

VenuShree, Mathur, I., Yadav, G. and Joshi, N.

Digital Humanities: Can Machine Translation Replace Human Translation

International Journal of Recent Technology and Engineering (IJRTE)

7(6)

128-134

9.      

Mukund, V., Behera, S.K., Alam, A. and Nagaraju, G.P.

Molecular docking analysis of nuclear factor-?B and genistein interaction in the context of breast cancer

Bioinformation

15(1)

11-17

10.   

Mukund, V., Saddala, M.S., Farran, B., Mannavarapu, M., Alam, A. and Nagaraju, G. P.

Molecular docking studies of angiogenesis target protein HIF-1? and genistein in breast cancer

Gene

701

169-172

11.   

Sharma, P. and Joshi, N.

Knowledge-Based Method for Word Sense Disambiguation by Using Hindi WordNet

Engineering, Technology & Applied Science Research

9(2)

3985-3989

12.   

Singh, A., Juneja, D., Singh, R., and Mukherjee S.

A clustered neighbourhood consensus algorithm for a generic agent interaction protocol

International Journal of Advanced Intelligence Paradigms

12 (3/4)

305 - 316

2018

13.   

Singh, A, Kaushik, R, Kuntal H and Jayaram, B.

PvaxDB: a comprehensive structural repository of Plasmodium vivax proteome Database:

The Journal of Biological Databases and Curation.

bay021

NA

14.   

Tripathi, N., Paliwal, S., Sharma, S., Verma, K., Gururani, R., Tiwari, A., Verma, A., Chauhan, M., Singh, A., Kumar, D., Pant, A.

Discovery of Novel Soluble Epoxide Hydrolase Inhibitors as Potent Vasodilators

Scientific Reports

8

14604 (11 pages)

15.   

Nagpal, A., Paliwal, S.

Discovery of novel and selective c-jun nh2-terminal kinases 2 inhibitors by two-dimensional quantitative structure-activity relationship model development, molecular docking and absorption, distribution, metabolism, elimination prediction studies: An in silico approach

Asian Journal of Pharmaceutical and Clinical Research

11

pages 9

16.   

Tripathi, A.C., Upadhyay, S., Paliwal, S., Saraf, S.K.

Derivatives of 4,5-dihydro (1H) pyrazoles as possible MAO-A inhibitors in depression and anxiety disorders: synthesis, biological evaluation and molecular modeling studies

Medicinal Chemistry Research

27

1485-1503

17.   

Mishra, P., Kesar, S., Paliwal, S.K., Chauhan, M., Madan, K.

In-Silico Screening of Ligand Based Pharmacophore, Database Mining and Molecular Docking on 2, 5-Diaminopyrimidines Azapurines as Potential Inhibitors of Glycogen Synthase Kinase-3?

Central Nervous System Agents in Medicinal Chemistry

18 (2)

150-158

18.   

Chauhan, M., Paliwal, S.K., Kesar, S., Neetika, Nagpal, A.

Applications of chemometric methods to elucidate physicochemical requirements for binding of PTP1B inhibitors to its target

Journal of Reports in Pharmaceutical Sciences

7 (2)

138-155

19.   

Dewangan, D., Nakhate, K., Mishra, A., Thakur, A.S., Rajak, H., Dwivedi, J., Sharma, S., Paliwal, S

Design, Synthesis, and Characterization of Quinoxaline Derivatives as a Potent Antimicrobial Agent

Journal of Heterocyclic Chemistry

56 (2)

566-578

20.   

Kapil, A., Jha, C.K. and Shanker, A.,

Data Mining to Detect Common, Unique,and Polymorphic Simple Sequence Repeats

Bioinformatics: Sequences, Structures, Phylogeny

NA

141-154

21.   

Gupta, C., Jain, A. and Joshi, N.

A Novel Approach to Feature Hierarchy in Aspect Based Sentiment Analysis Using OWA Operator

Computing and Networking

46

661-667

22.   

Sharma, O., Kumar, S. and Joshi, N.

SRPF Interest Measure Based Classification to Extract Important Patterns

Lecture Notes in Networks and Systems

46

523-530

23.   

Goyal, H., Joshi, N. and  Sharma, C.

An Empirical Analysis of Geospatial Classification for Agriculture Monitoring

Procedia Computer Science

132

1102-1112

24.   

Chopra, D., Joshi, N. and Mathur, I.

A Review on Machine Translation in Indian Languages

Engineering, Technology & Applied Science Research

8(5)

3475-3478

25.   

Kumar C., Singh, A.K., Kumar, P., Singh, R., Singh, S.

SPIHT-based multiple image watermarking in NSCT domain

Concurrency Computat Pract Exper.

NA

e4912 (9 pages)

26.   

Nigam, S., Singh, R., Misra, A.K.

A Review of Computational Approaches for Human Behavior Detection

Archives of Computational Methods in Engineering

in Press

in Press

27.   

Nigam, S., Singh, R., Misra, A.K.

Efficient facial expression recognition using histogram of oriented gradients in wavelet domain

Multimed Tools and  Applications

77

28725-28747

28.   

Gupta, C., Jain, A. and Joshi, N.

Fuzzy Logic in Natural Language Processing- A Closer View

Procedia Computer Science

132

1375-1384

29.   

Ahmed, S.A., Mathur, I., Katyayan, P. and Joshi, N.

Implications of English as a Pivot Language in Arabic-Hindi Machine Translation

International Journal of Engineering and Advanced Technology (IJEAT)

8(4)

271-277

2017

30.   

Sharma V. and Singh S.P.

In Silico Studies of Conformational Changes in wheat Heat Shock Proteins.

MOJ Protemics & Bioinformatics.

5(1)

00149

31.   

Singh S. P. and Gupta D.

Discovery of potential inhibitor against human acetylcholinesterase: a molecular docking and molecular dynamics investigation.

Computational Biology and Chemistry.

68

224-230.

2016

32.   

Singh, P.K., Singh, A., Pawar, D.V., Devanna, B. N., Singh, J., Sharma, V. and Sharma, T.R.

A web-based microsatellite database for the Magnaporthe oryzae genome.

Bioinformation.

12

388-390.

33.   

Singh, R., Tiwari, J.K., Rawat, S., Sharma, V. and Singh, B.P.

Monitoring gene expression pattern in somatic hybrid of Solanum tuberosum and S. pinnatisectum for late blight resistance using microarray analysis.

Plant Omics Journal.

9(1)

99-105.

34.   

Singh, S., Rawat, S., Sharma, V., Tiwari, J. K., Singh, B.P.

Homology modelling and Structural analysis of flowering locus T protein from Solanum tuberosum.

International Journal of Computational Bioinformatics and In Silico Modeling.

5

799-807.

35.   

Singh,V.,  Sharma, V. and Katara, P.

Comparative transcriptomics of rice and exploitation of target genes for blast infection.

AgriGene.

8

143-150

36.   

Singh, P., Banik, R.M. and Shah, P.

Amino acid sequence determination, in silico tertiary structure prediction and anticancer activity assessment of L-glutaminase from Bacillus cereus.

Network Modeling Analysis in Health Informatics and Bioinformatics.

5(1)

1-9.

37.   

Singh, V., Alam, A., Katara, P. and Sharma, V.

Co-Regulatory Genes of CEBiP: A Stress Responsive Gene for Rice Blast Infection.

MOJ Proteomics & Bioinformatics.

4 (3).

123-128.

38.   

Singh, S.P., Gupta, D.K.

Dynamic Conformational Ensembles Regulate Casein Kinase - 1 Isoforms: Insights from Molecular Dynamics and Molecular Docking Studies.

Computational Biology and Chemistry.

61

39-46.

39.   

Srivastava, D., Shanker, A.

Identification of simple sequence repeats in Chloroplast genomes of Magnoliids through bioinformatics approach.

Interdisciplinary Sciences: Computational Life Sciences.

8(4)

327-336

40.   

Kabra, R., Kapil, A., Attarwala, K., Rai, P.K., Shanker, A.

Identification of common, unique and polymorphic microsatellites among 73 cyanobacterial genomes.

World Journal of Microbiology and Biotechnology.

32(4)

71

2015

41.   

Goyal S, Jamal S, Shanker A, Grover A

Structural investigations of T854A mutation in EGFR and identification of novel inhibitors using structure activity relationships.

BMC Genomics

16(Suppl 5).

S8

42.   

Srivastava D, Shanker A

In silico mining of simple sequence repeats in chloroplast genome of Trifolium subterraneum.

Researcher

7

63-66

43.   

Jamal S, Goyal S, Shanker A, Grover A

Checking the STEP-associated trafficking and internalization of glutamate receptors for reduced cognitive deficits: A machine learning approach-based cheminformatics study and its application for drug repurposing.

PlosOne

10(6)

e0129370

44.   

Srivastava D, Shanker A

Mining of simple sequence repeats in chloroplast genome sequence of Cocos nucifera.

Applied Research Journal

1

51-54.

45.   

Katara P and Kuntal H.

TPMT Polymorphism: When shield becomes weakness.

Interdisciplinary Sciences,

8(2)

150-5.

46.   

Shah, P., Tiwari, S., Siddiqi, M. I.

Recent progress in the identification and development of antimalarial agents using virtual screening based approaches.

Comb Chem High Throughput Screen,

18 (3)

257-68

47.   

Das, S., Shah, P., Tandon, R., Yadav, N.K., Sahasrabuddhe, A.A., Sundar, S., Siddiqi, M.I. and Dube, A.,

Over-Expression of Cysteine Leucine Rich Protein Is Related to SAG Resistance in Clinical Isolates of Leishmania donovani.

PLoS Negl Trop Dis,

9(8),

p.e0003992.

48.   

Shrivastava, N., Nag, J. K., Pandey, J., Tripathi, R. P. Shah, P. Siddiqi, M. I., Misra-Bhattacharya, S.,

Homology Modeling of NAD+-Dependent DNA Ligase of the Wolbachia Endosymbiont of Brugia malayi and Its Drug Target Potential Using Dispiro-Cycloalkanones.

Antimicrob Agents Chemother,

59 (7),

3736-47.

2014

49.   

Kumar M, Kapil A, Shanker A.

MitoSatPlant: Mitochondrial microsatellites database of viridiplantae.

Mitochondrion.

19 (B)

334-337

50.   

Sharma V.

Potential Chemopreventation of 7, 12 dimethyl benz (a) anthracene induced renal carcinogenesis by Moring oleifera-pods and its isolated Saporin.

IJCB.

29(2)

202-209

51.   

Wahi, D., Jamal, S., Goyal, S., Singh, A., Jain, R., Rana, P., and Grover,

Chemoinformatics models based on machine learning approaches for design of USP1/ UAF1 abrogators as anticancer agents.

Systen & Synth.

9

33-43

52.   

Gupta, A., Shah, P., Haider, A., Gupta, K., Siddiqi, M. I., Ralph, S. A. and Habib, S.

Reduced ribosomes of the apicoplast and mitochondrion of Plasmodium spp. and predicted interactions with antibiotics.

Open biology,

4(5)

140045-140059

53.   

Shah, P., Tiwari, S. and Siddiqi, M. I.

Integrating molecular docking, CoMFA analysis, and machine-learning classification with virtual screening toward identification of novel scaffolds as Plasmodium falciparum enoyl acyl carrier protein reductase inhibitor.

Medicinal Chemistry Research,

23

3308-3326

54.   

Singh, S., Tiwari, J. K., Sharma, V., Singh, B.P. and Rawat, S.

Role of pathogenesis related protein families in defence mechanism with potential role in applied biotechnology,

International Journal of Advanced Research

2

210-226.

55.   

Singh, S., Tiwari, J. K., Sharma, V., Singh, B.P. and Rawat, S.

In-Silico Analysis of Structural Properties of Pathogen-Related Protein (PR1) in Potato Somatic Hybrid.

Journal of Advanced Bioinformatics Applications and Research

5

150-162

56.   

Pareek, S.S., Joshi, R.K., Ravi, I. Rout, E., Kumar, S. and Sharma, V.

Identification and Characterization of NBS-LRR Class Resistance Gene Analogs in Mothbean (Vigna aconitifolia),

J. Plant Pathology.

97

153-159

57.   

Sekhwal, M.K., Swami, A. K., Sharma, V., and Sarin, R.

Identification of transcription factors in Sorghum bicolor using GO-terms semantics similarity.

Cellular and Molecular Biology Letters,

20(1)

1-23

58.   

Shanker A.

Simple sequence repeats mining using computational approach in chloroplast genome of Marchantia polymorpha.

Arctoa

23

145-149

59.   

Shanker A.

Computational mining of microsatellites in the chloroplast genome of Ptilidium pulcherrimum, a liverwort.

International Journal of Environment

3

50-58

60.   

Shanker A.

Computationaly mined microsatellites in chloroplast genome of Pellia endiviifolia.

Archive for Bryology

199

1-5

2013

61.   

Sekhwal, M.K., Sharma, V. and Sarin, R.

Identification of MFS Proteins in Sorghum Using Semantic Similarity.

Theory in Biosciences, DOI: 10.1007/s12064-012-0174-z

132

105-113

62.   

Raghav, D., Sharma, V., and Agarwal, S.M.,

Structural investigation of deleterious non-synonymous SNPs of EGFR gene. 0149-x.

Interdisciplinary Sciences: Computational Life Sciences,

5(1)

60-68.

63.   

Raghav, D., and Sharma, V.,

An in-silico evaluation of deleterious non-synonymous SNPs in ErbB3 oncogene.

BioResearch Open Access.

2(3)

206-211.

64.   

Kuntal, H., and Sharma, V.,

SNP analysis in core mitochondrial genes of Chlorophytes.

International Journal of Computational Bioinformatics and In Silico Modeling,

2(5)

234-238.

65.   

Sekhwal, M.K., Sharma, V., and Sarin, R.,

Annotation of glycoside hydrolases in Sorghum bicolor using proteins interaction approach.

Journal of Proteome Science Computational Biology,

2(1)

1-8

66.   

Shanker, A.,

Inference of bryophytes paraphyly using mitochondrial genomes.

Archive for Bryology

165

1-5

67.   

Shanker, A.,

Combined data from chloroplast and mitochondrial genome sequences showed paraphyly of bryophytes.

Archive for Bryology

171

1-9

2012

68.   

Sharma, V., Sekhwal, M.K., Swami, A.K. and Sarin, R.

Identification of drought responsive proteins using gene ontology hierarchy.

Bioinformation

8(13)

595-599

69.   

Sharma V, Kuntal H, Katara P, Sharma S.

Identification of SSRs in EST sequences of  Lolium and Agrostis species.

International Journal of Integrative Research

13(2)

80-87

70.   

Shanker A and Sharma V.

Chloroplast genome analysis to detect transition link between bryophytes and pteridophytes: A Bioinformatics Approach.

 

Archive for Bryology.

121

1-8

71.   

Katara P, Grover A and Sharma V.

In Silico Prediction of Drug Targets in Phytopathogenic Pseudomonas syringae pv. phaseolicola: Charting a Course for Agrigenomics Translation Research.

OMICS: A Journal of Integrative Biology

16(12)

700-706

72.   

Kuntal H, Sharma V and Daniell H.

Microsatellite analysis in organelle genomes of Chlorophyta.

Bioinformation.

8(6)

255-259.

73.   

Sekhwal, M.K., Swami, A.K., Sarin, R. and Sharma, V.

Identification of salt treated proteins in sorghum using gene ontology linkage.

Physiology and Molecular Biology of Plants,

18

209-216.

2010

74.   

Gautam, B., Katara P., Singh, S. and Farmer, R.

Drug target identification using gene expression microarray data of Toxoplasma gondii

International Journal of Biometric and Bioinformatics

4(3)

113-124

75.   

Katara, P., Sharma, N., Sharma, S., Khatri, I., Kaushik, A., Kaushal, L. and Sharma, V.

Comparative microarray data analysis for the expression of genes in the pathway of glioma

Bioinformation

5(1)

31-34

76.   

Katara P., Singh A., Ragav, D. and Sharma, V.

Analysis of Regulatory Genomics and Gene Expression Pattern of Medicinal Importance Genes of Helicobacter Pylori

J Comput Sci Syst Biol

3(1)

010-015

2009

77.   

Katara, P., Agarwal, M., Jeena, G., Karkra, S., Sharma, I. and Sharma, V.

In-silico Prediction of the Regulatory Element Patterns of Human Pathogen Mycobacterium tuberculosis.

International Journal of Biotechnology & Biochemistry

5(1)

7-13

78.   

Shanker, A. and Sharma, V.

Annotation Jargon- It's not too late to correct it

Current Science

97

983-984

79.   

Shanker, A., Sharma, V. and Daniell, H.

A novel index to identify unbiased conservation between proteomes.

International Journal of Integrative Biology

7

32-38

2008

80.   

Singh, A., Mishra, S., Raghav, D., Shanker, A. and Sharma, V.

In silico Method for theIdentification of Mycobacterial sp. Potential Drug Targets.

ICCES

6

119-123

81.   

Katara, P. and Sharma,

In-silico prediction of the essentiality of osmoprotectant genes of Pseudomonas aeruginosa.

J. Computational Intelligence in Bioinformatics

1(2-3)

143-148

2007

82.   

Shanker, A., Bhargava, A., Bajpai, R., Singh, S., Srivastava, S. and Sharma, V.

Bioinformatically mined simple sequence repeats in unigene of Citrus sinensis.

Sci. Horti.

113

353-361

83.   

Shanker, A., Singh, A. and Sharma, V.

In silico mining in expressed sequences of Neurospora crassa for identification and abundance of microsatellites.

Microbiological Research

162

250-256

 

Books Published:

  • Sharma, V., Munjal, A. and Shanker, A. 2008. Textbook of Bioinformatics.Rastogi Publications,Meerut.
  • Shanker, A. 2015. The Programming Language Perl for Biologists. Grin Publishing

 

 

Notified Under Section (3) of University Grants Commission Act.
@ 2007 Banasthali Vidyapith.